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Get Open Reading Frames represented by more than a given number of ESTs from EST Libraries that are/are not randomly sequenced.

Description:

Retrieve information on Open Reading Frames that are represented by more than a given number of ESTs from EST Libraries that are/not randomly sequenced


Runtime:

Can take about 2-3 minutes to complete.


Input:

Details
Genome The genome of interest
Number of ESTs Minimum number of ESTs that represent the Open Reading Frame from the EST Library
Randomly sequenced Chose between true/false for libraries that are/not randomly sequenced
Examples
Genome Number of ESTs Randomly sequenced
Gibberella zeae 30 true
Magnaporthe grisea 20 false

Output:

Description
General information on the Open Reading Frame
Details
Open Reading Frame ID Identifier of the Open Reading Frame
Genome Genome which the Open Reading Frame belongs to
# ESTs Number of ESTs that represent this Open Reading Frame
# EST Unisequences Number of EST Unisequences that represent this Open Reading Frame
Locus Tag The Locus Tag of this Open Reading Frame
Protein ID Identifier of the protein product of this Open Reading Frame
Protein Description The description of the protein

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