Description:

Retrieve the SignalP prediction, i.e., whether it's predicted to be secretory or non-secretory, for a given protein.

Runtime:

Can take about 1-2 minutes to complete.

Input:

Details

Protein ID	Identifier, name or symbol of the protein of interest.

Examples

Protein ID
Bud20p
SPBC336.10c
Pra81002

Output:

Description

Returns the result of the SignalP prediction for each protein along with the associated Sprob. Furthermore, the identifier of the MCL and OrthoMCL clusters in which the protein has been placed, if any, are also provided.

Details

Protein ID	Identifier of the protein
Genome	Genome provided as input
SignalP Prediction	SignalP prediction for the protein, i.e., indication whether it is predicted to be secretory or non-secretory
SProb	Sprob associated with the SignalP prediction
Pfam Annotation	List of Pfam A annotations of the protein.
PSort Prediction	Sub-cellular localisation of the protein as predicted by PSort.
Wolf-PSort Prediction	Sub-cellular localisation as predicted by Wolf-PSort.
MCL Cluster ID	Identifier of the MCL cluster the protein has been placed in, if any
OrthoMCL Cluster ID	Identifier of the OrthoMCL cluster the protein has been placed in, if any
Protein Sequence	Sequence of the protein