Description:
Returns a summary of the MCL cluster analysis for a given genome.
Runtime:
Can take about 1-2 minutes to complete.
Input:
- Details
-
Genome |
Name of the genome of interest. To retrieve a list of genomes
from the database, the button "Existing Values..." can be used. |
- Examples
-
Genome |
Debaryomyces hansenii |
Eremothecium gossypii |
Neurospora crassa |
Output:
- Description
-
Provides a summary of the MCL cluster analysis for a given
genome. The summary included the number of Open Reading Frames
(ORF) that have been placed into clusters as well as the number of
ORFs that are not part of a cluster. |
- Details
-
Genome |
Genome that has been provided as input |
# ORFs |
Number of ORFs in the given genome |
# clusters with ORFs |
Number of clusters with ORFs of the given genome |
# ORFs not in clusters |
Number of ORFs of the given genome that have not been placed
into clusters |
% of ORFs not in clusters |
Percentage of ORFs of the given genome that have not been placed
into clusters |
Navigation |
Link that enable the execution of the query Mcl Cluster
analysis - Get MCL clusters that contain proteins of a given genome. using
the given genome as input. |