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Get ESTs for a given genome.

Description:

Retrieve information of all ESTs of the genome of interest.


Runtime:

Can take about 5-15 minutes to complete depending on the number of ESTs to retrieve (e.g., retrieving all 41,900 ESTs for Magnaportha grisea takes about 15 minutes, whereas the other two examples take about 5 minutes to return all 17,000 and 8,400 ESTs).


Input:

Details
Genome The genome of interest
Examples
Genome
Gibberella zeae
Ustilago maydis
Magnaporthe grisea

Output:

Description
General information on the EST of the given genome.
Details
EST ID Index or identifier of the EST
Genome Genome which the EST belongs to.
EST Library ID Identifier of the EST Library which the EST belongs to.
# Bases Number of bases of the EST.
EST Unisequence ID Identifier of the EST Unisequence group which the EST belongs to.
dbEST GI Number GenBank dbEST GI number of the EST.
Open Reading Frame ID Identifier of the Open Reading Frame which the EST/EST Unisequence represents.
EST Sequence Sequence of the EST

e-Fungi has been funded by the BBSRC Bioinformatics and E-science Programme II