Description:

Retrieves the sub-cellular localisation for a protein of interest. Localisations have been predicted using PSort and Wolf-PSort.

Runtime:

Can take about 1 minute to retrieve the sub-cellular localisation for the given protein.

Input:

Details

Protein ID	Identifier, name or symbol of the protein of interest.

Examples

Protein ID
BUD20
XP_448494.1
YPR041W

Output:

Description

PSort and Wolf-PSort predictions for protein of interest, including the scores associated with each prediction. Furthermore, the sequence of the protein is returned as well as the identifier of the MCL and OrthoMCL clusters it can be found, if it has been placed into a cluster.

Details

Protein ID	Identifier of the protein.
Genome	Genome the protein belongs to.
PSort Prediction	Sub-cellular localisation of the protein as predicted by PSort.
k	Score k associated with the PSort prediction.
Wolf-PSort Prediction	Sub-cellular localisation as predicted by Wolf-PSort.
Score	Score associated with the Wolf-PSort prediction.
Pfam Annotation	List of Pfam A annotations of the protein.
SignalP Prediction	SignalP prediction for the protein.
MCL Cluster ID	Identifier of the MCL cluster the protein has been placed in, if any.
OrthoMCL Cluster ID	Identifier of the OrthoMCL cluster the protein has been placed in, if any.
Protein Sequence	Sequence of the protein.