Description:

Retrieve annotation for all the proteins that are in the same OrthoMCL cluster as the protein of interest.

Runtime:

Can take about 1 minute to retrieve all proteins that are in the same cluster as the given protein.

Input:

Details

Protein ID	Identifier of the protein of interest. Identifier can be the name, symbol or an identifier of the protein.

Examples

Protein ID
RO3G_17408
tif512
NCU02257

Output:

Description

Annotation for all proteins in the OrthoMCL cluster containing the protein of interest. Annotation includes GO and Enzyme annotation, KEGG pathways the proteins are known to be involved in, identified Pfam motifs, results of Wolf-PSort, PSort and SignalP predictions.

Details

Protein ID	Identifier of the protein.
Symbol	Symbol of the protein.
Genome	Genome that the protein belongs to.
Gene ID	Identifier of the gene.
Locus Tag	Locus Tag of the gene.
Chr	Chromosome on which the gene is located.
Start	Start position of the gene (in bp).
MCL cluster ID	Identifier of the MCL cluster in which the protein can be found.
OrthoMCL cluster ID	Identifier of the OrthoMCL cluster in which the protein can be found.
PSort Prediction	Sub-cellular localisation of the protein as predicted by PSort.
Wolf-PSort Prediction	Sub-cellular localisation of the protein as predicted by Wolf-PSort.
SignalP Prediction	Information whether the protein has been predicted to be a secretory or non-secretory protein (prediction done using SignalP).
GO Annotations	List of all the GO annotations assigned to the protein.
Pfam A Annotations	List of all the Pfam A domains that have been identified for the protein.
Enzymes	List of all the Enzyme annotations assigned to the protein.
Pathways	List of all the KEGG pathways which the protein is part of.
Protein Sequence	Sequence of the protein.