[1] C. Wroe, C. Goble, M. Greenwood, P. Lord, S. Miles, J. Papay, T. Payne, and L. Moreau. Automating experiments using semantic data on a bioinformatics grid. IEEE Intelligent Systems, 19(1):48-55, 2004.
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[2] Jun Zhao, Chris J. Wroe, Carole A. Goble, Robert Stevens, Dennis Quan, and Mark Greenwood. Using semantic web technologies for representing e-Science provenance. In Third International Semantic Web Conference, Hiroshima, Japan, November 2004.
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[3] Chris J. Wroe, Robert D. Stevens, Carole A. Goble, and Michael Ashburner. A methodology to migrate the gene ontology to a description logic environment using daml+oil. In Proceedings of the 8th Pacific Symposium on Biocomputing (PSB), Hawaii, January 2003.
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[4] Mark Greenwood, Chris J. Wroe, Robert D. Stevens, Carole A. Goble, and Matthew Addis. Are bioinformaticians doing e-business? In EuroWeb 2002 The Web and the GRID: from e-science to e-business, Oxford, December 2002.
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[5] C Wroe, R Stevens, C Goble, A Roberts, and M Greenwood. A suite of DAML+OIL ontologies to describe bioinformatics web services and data. International Journal of Cooperative Information Systems, 12(2):197-224, 2003.
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[6] Robert Stevens, Chris Wroe, Sean Bechhofer, Phillip Lord, Alan Rector, and Carole Goble. Building ontologies in DAML + OIL. Comparative and Functional Genomics, 4(1), 2003.
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[7] Robert Stevens, Chris Wroe, Phillip Lord, and Carole Goble. Ontologies in bioinformatics. In Stefan Staab and Rudi Studer, editors, Handbook on Ontologies, pages 635-657. Springer, 2003.
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[8] R.D. Stevens, H.J. Tipney, C.J. Wroe, T.M. Oinn, M. Senger, P.W. Lord, C.A. Goble, A. Brass, and M. Tassabehji. Exploring Williams Beuren Syndrome Using myGrid. In Bioinformatics, volume 20, pages i303-310, 2004. Intelligent Systems for Molecular Biology (ISMB) 2004.
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[9] Proceedings UK OST e-Science 2nd All Hands Meeting. EPSRC, September 2003. ISBN 1-904425-11-9.
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[10] Phillip Lord, Chris Wroe, Robert Stevens, Carole Goble, Simon Miles, Luc Moreau, Keith Decker, Terry Payne, and Juri Papay. Semantic and personalised service discovery. In Proc UK e-Science All Hands Meeting 2003 [9], pages 787-794. ISBN 1-904425-11-9.
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[11] J Zhao, CA Goble, M Greenwood, C Wroe, and R Stevens. Annotating, linking and browsing provenance logs for e-Science. In 2nd Intl Semantic Web Conference (ISWC2003) Workshop on Retrieval of Scientific Data, Florida, USA, October 2003. submitted.
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[12] R. Stevens, H.J. Tipney, C. Wroe andT. Oinn, M. Senger, C.A. Goble P. Lord, A. Brass, and M. Tassabehji. Exploring Williams-Beuren Syndrome using . In Proceedings of 12th International Conference on Intelligent Systems in Molecular Biology, 2004. Accepted for Publication.
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[13] Chris Wroe, Phillip Lord, Simon Miles, Juri Papay, Luc Moreau, and Carole Goble. Recycling services and workflows through discovery and reuse. In Proc UK e-Science All Hands Meeting 2004, pages 622-629. EPSRC, 2004.
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[14] Phillip Lord, Pinar Alper, Chris Wroe, Robert Stevens, Carole Goble, Jun Zhao, Duncan Hull, and Mark Greenwood. The Semantic Web: Service discovery and provenance in myGrid. Semantic Web for Life Sciences Workshop, October 2004.
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[15] Phillip Lord, Chris Wroe, Robert Stevens, Carole Goble, Simon Miles, Luc Moreau, Keith Decker, Terry Payne, and Juri Papay. Semantic and Personalised Service Discovery. In W. K. Cheung and Y. Ye, editors, WI/IAT 2003 Workshop on Knowledge Grid and Grid Intelligence, pages 100-107, Halifax, Canada, October 2003.
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[16] Luc Moreau, Simon Miles, Carole Goble, Mark Greenwood, Vijay Dialani, Matthew Addis, Nedim Alpdemir, Rich Cawley, David De Roure, Justin Ferris, Rob Gaizauskas, Kevin Glover, Chris Greenhalgh, Mark Greenwood, Peter Li, Xiaojian Liu, Phillip Lord, Michael Luck, Darren Marvin, Tom Oinn, Norman Paton, Stephen Pettifer, Milena V Radenkovic, Angus Roberts, Alan Robinson, Tom Rodden, Martin Senger, Nick Sharman, Robert Stevens, Brian Warboys, Paul Watson, and Chris Wroe. On the Use of Agents in a BioInformatics Grid. In Network Tools and Applications in Biology (NETTAB'2002) - Agents in Bioinformatics, Bologna, Italy, July 2002.
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MyGrid is an e-Science Grid project that aims to help biologists and bioinformaticians to perform workflow-based in silico experiments, and help to automate the management of such workflows through personalisation, notification of change and publication of experiments. In this paper, we describe the architecture of myGrid and how it will be used by the scientist. We then show how myGrid can benefit from agents technologies. We have identified three key uses of agent technologies in myGrid: user agents, able to customize and personalise data, agent communication languages offering a generic and portable communication medium, and negotiation allowing multiple distributed entities to reach service level agreements.
[17] Alan L. Rector, Chris Wroe, Jeremy Rogers, and Angus Roberts. Untangling taxonomies and relationships: personal and practical problems in loosely coupled development of large ontologies. In K-CAP 2001, pages 139-146, 2001.
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[18] Alan L. Rectora, Peter D. Johnson, Samson W. Tu, Chris Wroe, and Jeremy Rogers. Interface of inference models with concept and medical record models. In AIME, pages 314-323, 2001.
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[19] Jeremy E. Rogers, Chris J. Wroe, Angus Roberts, A. Swallow, David Stables, Judy Cantrill, and Alan L. Rector. Automated quality checks on repeat prescribing. Br J Gen Pract, 53:838-844, 2003.
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[20] Jeremy E. Rogers, Chris J. Wroe, Angus Roberts, A. Swallow, David Stables, Judy Cantrill, and Alan L. Rector. Automated quality checks on repeat prescribing. In Proc HCMMII, 2002.
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[21] Chris J. Wroe, James J. Cimino, and Alan L. Rector. Integrating existing drug formulation terminologies into an hl7 standard classification using opengalen. In Annual Fall Symposium of American Medical Informatics Association, Washington DC., November 2001.
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[22] Chris J. Wroe, Angus K. Roberts, and Alan L. Rector. Drug information sources: Linking a clinical drug ontology to product information databases. In Conference proceedings Healthcare computing (HC2001), Harrogate, UK, March 2001. BCS Health Informatics Committee.
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[23] Jeremy E. Rogers, Angus Roberts, W. Danny Solomon, Egbert van der Haring, Chris J. Wroe, Peter E. Zanstra, and Alan Rector. Galen ten years on: Tasks and supporting tools. In V. Patel et al., editor, Proceedings of MEDINFO2001, pages 256-260. IOS Press, 2001.
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[24] Chris J. Wroe, W. Danny Solomon, Alan L. Rector, and Jeremy Rogers. Dopamine - a tool for visualizing clinical properties of generic drugs. In Branko Kavsek Nada Lavrac, Silvia Miksch, editor, The Fifth Workshop on Intelligent Data Analysis in Medicine and Pharmacology (IDAMAP-2000), Workshop Notes of the 14th European Conference on Artificial Intelligence (ECAI-2000), Berlin, August 2000.
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[25] Angus Roberts, W. Danny Solomon, Jeremy E. Rogers, Chris J. Wroe, and Alan Rector. Having our cake and eating it too: How the galen intermediate representation reconciles internal complexity with users' requirements for appropriateness and simplicity. In Annual Fall Symposium of American Medical Informatics Association, pages 819-23, Los Angeles CA., November 2000. Hanley & Belfus Inc. Philadelphia PA.
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[26] Chris J. Wroe, W. Danny Solomon, Alan L. Rector, and Jeremy Rogers. Inheritance of drug information. In Annual Fall Symposium of American Medical Informatics Association, Los Angeles CA., November 2000. Hanley & Belfus Inc. Philadelphia PA.
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[27] Danny Solomon, Chris J. Wroe, Jeremy Rogers, and Alan L. Rector. A reference terminology for drugs. In Annual Fall Symposium of American Medical Informatics Association, Washington DC., November 1999. Hanley & Belfus Inc. Philadelphia PA.
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