@ARTICLE{discoverieee, AUTHOR = {C. Wroe and C. Goble and M. Greenwood and P. Lord and S. Miles and J. Papay and T. Payne and L. Moreau}, TITLE = {Automating Experiments Using Semantic Data on a Bioinformatics Grid.}, JOURNAL = {IEEE Intelligent Systems}, YEAR = 2004, VOLUME = {19}, NUMBER = 1, URL = {http://csdl.computer.org/comp/mags/ex/2004/01/x1048abs.htm}, PAGES = {48-55} }
@INPROCEEDINGS{Zhoa04, AUTHOR = {Jun Zhao and Chris J. Wroe and Carole A. Goble and Robert Stevens and Dennis Quan and Mark Greenwood}, TITLE = {Using Semantic Web Technologies for Representing {e-Science} Provenance}, BOOKTITLE = {Third International Semantic Web Conference}, YEAR = {2004}, ADDRESS = {Hiroshima, Japan}, MONTH = {November} }
@INPROCEEDINGS{Wroe03, AUTHOR = {Chris J. Wroe and Robert D. Stevens and Carole A. Goble and Michael Ashburner}, TITLE = {A Methodology To Migrate The Gene Ontology To A Description Logic Environment Using DAML+OIL}, BOOKTITLE = {Proceedings of the 8th Pacific Symposium on Biocomputing (PSB)}, YEAR = {2003}, ADDRESS = {Hawaii}, MONTH = {January}, URL = {http://helix-web.stanford.edu/psb03/wroe.pdf} }
@INPROCEEDINGS{Greenwood02, AUTHOR = {Mark Greenwood and Chris J. Wroe and Robert D. Stevens and Carole A. Goble and Matthew Addis}, TITLE = {Are bioinformaticians doing e-Business?}, BOOKTITLE = {EuroWeb 2002 The Web and the GRID: from e-science to e-business}, YEAR = {2002}, ADDRESS = {Oxford}, MONTH = {December}, URL = {http://ewic.bcs.org/conferences/2002/euroweb/session2/paper3.htm} }
@ARTICLE{wroe02, AUTHOR = {C Wroe and R Stevens and C Goble and A Roberts and M Greenwood}, TITLE = {A suite of {DAML+OIL} ontologies to describe bioinformatics web services and data.}, JOURNAL = {International Journal of Cooperative Information Systems}, YEAR = 2003, VOLUME = 12, NUMBER = 2, PAGES = {197-224} }
@ARTICLE{sofg03, AUTHOR = {Robert Stevens and Chris Wroe and Sean Bechhofer and Phillip Lord and Alan Rector and Carole Goble}, TITLE = {Building ontologies in {DAML + OIL}}, JOURNAL = {Comparative and Functional Genomics}, YEAR = 2003, VOLUME = 4, NUMBER = 1, URL = {http://www3.interscience.wiley.com/cgi-bin/issuetoc?ID=102531153} }
@INCOLLECTION{onto-handbook-chap:03, AUTHOR = {Robert Stevens and Chris Wroe and Phillip Lord and Carole Goble}, EDITOR = {Stefan Staab and Rudi Studer}, BOOKTITLE = {Handbook on Ontologies}, TITLE = {Ontologies in Bioinformatics}, PUBLISHER = {Springer}, YEAR = 2003, PAGES = {635-657} }
@INPROCEEDINGS{mygrid-williams-ismb04, TITLE = {{Exploring Williams Beuren Syndrome Using \textsuperscript{my}Grid}}, AUTHOR = {R.D. Stevens and H.J. Tipney and C.J. Wroe and T.M. Oinn and M. Senger and P.W. Lord and C.A. Goble and A. Brass and M. Tassabehji}, BOOKTITLE = {Bioinformatics}, URL = {http://bioinformatics.oupjournals.org/cgi/content/abstract/20/suppl_1/i303?}, PAGES = {i303-310}, YEAR = 2004, NOTE = {Intelligent Systems for Molecular Biology (ISMB) 2004}, VOLUME = 20 }
@PROCEEDINGS{AHMProc03, TITLE = {Proceedings UK OST e-Science 2nd All Hands Meeting}, YEAR = {2003}, MONTH = {September}, PUBLISHER = {EPSRC}, NOTE = {ISBN 1-904425-11-9}, FILE = F }
@INPROCEEDINGS{all_hands_find03, AUTHOR = {Phillip Lord and Chris Wroe and Robert Stevens and Carole Goble and Simon Miles and Luc Moreau and Keith Decker and Terry Payne and Juri Papay}, TITLE = {Semantic and Personalised Service Discovery}, BOOKTITLE = {{Proc UK e-Science All Hands Meeting 2003}}, PAGES = {787-794}, CROSSREF = {AHMProc03} }
@INPROCEEDINGS{Zhao03, AUTHOR = {J Zhao and CA Goble and M Greenwood and C Wroe and R Stevens}, TITLE = {Annotating, linking and browsing provenance logs for {e-Science}}, BOOKTITLE = {2nd Intl Semantic Web Conference {(ISWC2003)} Workshop on Retrieval of Scientific Data}, YEAR = {2003}, ADDRESS = {{Florida, USA}}, MONTH = {October}, NOTE = {submitted} }
@INPROCEEDINGS{stevens2004, AUTHOR = {R. Stevens and H.J. Tipney and C. Wroe andT. Oinn and M. Senger and P. Lord, C.A. Goble and A. Brass and M. Tassabehji}, TITLE = {Exploring {Williams-Beuren Syndrome} Using \myg}, BOOKTITLE = {Proceedings of 12th International Conference on Intelligent Systems in Molecular Biology}, YEAR = 2004, NOTE = {Accepted for Publication} }
@INPROCEEDINGS{wroe2004, AUTHOR = {Chris Wroe and Phillip Lord and Simon Miles and Juri Papay and Luc Moreau and Carole Goble}, TITLE = {Recycling Services and Workflows through Discovery and Reuse}, BOOKTITLE = {{Proc UK e-Science All Hands Meeting 2004}}, YEAR = 2004, PAGES = {622-629}, PUBLISHER = {EPSRC}, LINK = {http://www.allhands.org.uk/2004/proceedings/papers/218.pdf} }
@MISC{swls2004, AUTHOR = {Phillip Lord and Pinar Alper and Chris Wroe and Robert Stevens and Carole Goble and Jun Zhao and Duncan Hull and Mark Greenwood}, TITLE = {{The Semantic Web: Service discovery and provenance in myGrid}}, HOWPUBLISHED = {Semantic Web for Life Sciences Workshop}, MONTH = {October}, YEAR = 2004 }
@INPROCEEDINGS{kggi03semantic, AUTHOR = {Phillip Lord and Chris Wroe and Robert Stevens and Carole Goble and Simon Miles and Luc Moreau and Keith Decker and Terry Payne and Juri Papay}, TITLE = {{Semantic and Personalised Service Discovery}}, ISBN = {0-9734039-0-X}, BOOKTITLE = {WI/IAT 2003 Workshop on Knowledge Grid and Grid Intelligence}, YEAR = 2003, EDITOR = {W. K. Cheung and Y. Ye}, ADDRESS = {Halifax, Canada}, MONTH = OCT, PAGES = {100--107} }
@INPROCEEDINGS{Moreau:NETTAB2002, AUTHOR = {Luc Moreau and Simon Miles and Carole Goble and Mark Greenwood and Vijay Dialani and Matthew Addis and Nedim Alpdemir and Rich Cawley and David De Roure and Justin Ferris and Rob Gaizauskas and Kevin Glover and Chris Greenhalgh and Mark Greenwood and Peter Li and Xiaojian Liu and Phillip Lord and Michael Luck and Darren Marvin and Tom Oinn and Norman Paton and Stephen Pettifer and Milena V Radenkovic and Angus Roberts and Alan Robinson and Tom Rodden and Martin Senger and Nick Sharman and Robert Stevens and Brian Warboys and Paul Watson and Chris Wroe}, TITLE = {{On the Use of Agents in a BioInformatics Grid}}, BOOKTITLE = {Network Tools and Applications in Biology (NETTAB'2002) --- Agents in Bioinformatics}, URL = {http://www.ecs.soton.ac.uk/~lavm/papers/nettab.ps}, YEAR = 2002, ADDRESS = {Bologna, Italy}, MONTH = JUL, MYGRID = {yes}, EXPORT = {yes}, ABSTRACT = {MyGrid is an e-Science Grid project that aims to help biologists and bioinformaticians to perform workflow-based {\em in silico\/} experiments, and help to automate the management of such workflows through personalisation, notification of change and publication of experiments. In this paper, we describe the architecture of myGrid and how it will be used by the scientist. We then show how myGrid can benefit from agents technologies. We have identified three key uses of agent technologies in myGrid: {\em user agents\/}, able to customize and personalise data, {\em agent communication languages\/} offering a generic and portable communication medium, and {\em negotiation\/} allowing multiple distributed entities to reach service level agreements.} }
@INPROCEEDINGS{rector01, AUTHOR = {Alan L. Rector and Chris Wroe and Jeremy Rogers and Angus Roberts}, TITLE = {Untangling taxonomies and relationships: personal and practical problems in loosely coupled development of large ontologies}, BOOKTITLE = {K-CAP 2001}, YEAR = {2001}, PAGES = {139-146}, FILE = F }
@INPROCEEDINGS{rector01b, AUTHOR = {Alan L. Rectora and Peter D. Johnson and Samson W. Tu and Chris Wroe and Jeremy Rogers}, TITLE = {Interface of Inference Models with Concept and Medical Record Models}, BOOKTITLE = {AIME}, YEAR = {2001}, PAGES = {314-323}, FILE = F }
@ARTICLE{Rogers03a, AUTHOR = {Jeremy E. Rogers and Chris J. Wroe and Angus Roberts and A. Swallow and David Stables and Judy Cantrill and Alan L. Rector}, TITLE = {Automated quality checks on repeat prescribing}, JOURNAL = {Br J Gen Pract}, YEAR = {2003}, VOLUME = {53}, PAGES = {838-844}, FILE = F }
@INPROCEEDINGS{Rogers02b, AUTHOR = {Jeremy E. Rogers and Chris J. Wroe and Angus Roberts and A. Swallow and David Stables and Judy Cantrill and Alan L. Rector}, TITLE = {Automated quality checks on repeat prescribing}, BOOKTITLE = {Proc HCMMII}, YEAR = {2002}, FILE = F }
@INPROCEEDINGS{WroeCimino01, AUTHOR = {Chris J. Wroe and James J. Cimino and Alan L. Rector}, TITLE = {Integrating Existing Drug Formulation Terminologies Into an HL7 Standard Classification using OpenGALEN}, BOOKTITLE = {Annual Fall Symposium of American Medical Informatics Association}, YEAR = {2001}, ADDRESS = {Washington DC.}, MONTH = {November} }
@INPROCEEDINGS{WroeDrugDB01, AUTHOR = {Chris J. Wroe and Angus K. Roberts and Alan L. Rector}, TITLE = {Drug information sources: Linking a clinical drug ontology to product information databases}, BOOKTITLE = {Conference proceedings Healthcare computing (HC2001) }, YEAR = {2001}, ADDRESS = {Harrogate, UK}, MONTH = {March}, ORGANIZATION = {BCS Health Informatics Committee} }
@INPROCEEDINGS{Rogers01, AUTHOR = {Jeremy E. Rogers and Angus Roberts and W. Danny Solomon and Egbert van der Haring and Chris J. Wroe and Peter E. Zanstra and Alan Rector }, TITLE = {GALEN Ten Years On: Tasks and Supporting tools }, BOOKTITLE = {Proceedings of MEDINFO2001}, YEAR = {2001}, EDITOR = {V. Patel et al.}, PAGES = {256-260}, PUBLISHER = {IOS Press}, LINK = {http://www.cs.man.ac.uk/mig/people/jeremy/papers/MEDINFO2000-GALEN-Ten-Years-On.pdf}, FILE = F }
@INPROCEEDINGS{WroeBerlin01, AUTHOR = {Chris J. Wroe and W. Danny Solomon and Alan L. Rector and Jeremy Rogers}, TITLE = {DOPAMINE - A tool for visualizing clinical properties of generic drugs}, BOOKTITLE = {{The Fifth Workshop on Intelligent Data Analysis in Medicine and Pharmacology (IDAMAP-2000), Workshop Notes of the 14th European Conference on Artificial Intelligence (ECAI-2000)}}, YEAR = {2000}, EDITOR = {Nada Lavrac, Silvia Miksch, Branko Kavsek}, ADDRESS = {Berlin}, MONTH = {August} }
@INPROCEEDINGS{Roberts00, AUTHOR = {Angus Roberts and W. Danny Solomon and Jeremy E. Rogers and Chris J. Wroe and Alan Rector}, TITLE = {Having our cake and eating it too: How the GALEN Intermediate Representation reconciles internal complexity with users' requirements for appropriateness and simplicity}, BOOKTITLE = {Annual Fall Symposium of American Medical Informatics Association}, YEAR = {2000}, PAGES = {819-23}, ADDRESS = {Los Angeles CA.}, MONTH = {November}, PUBLISHER = {Hanley & Belfus Inc. Philadelphia PA}, FILE = F }
@INPROCEEDINGS{Wroe00, AUTHOR = {Chris J. Wroe and W. Danny Solomon and Alan L. Rector and Jeremy Rogers}, TITLE = {Inheritance of Drug Information}, BOOKTITLE = {Annual Fall Symposium of American Medical Informatics Association}, YEAR = {2000}, ADDRESS = {Los Angeles CA.}, MONTH = {November}, PUBLISHER = {Hanley & Belfus Inc. Philadelphia PA}, FILE = F }
@INPROCEEDINGS{Solomon99, AUTHOR = {Danny Solomon and Chris J. Wroe and Jeremy Rogers and Alan L. Rector}, TITLE = {A reference terminology for drugs}, BOOKTITLE = {Annual Fall Symposium of American Medical Informatics Association}, YEAR = {1999}, ADDRESS = {Washington DC.}, MONTH = {November}, PUBLISHER = {Hanley & Belfus Inc. Philadelphia PA}, LINK = {http://www.cs.man.ac.uk/mig/projects/old/drugontology/papers/Reference-Terminology-For-Drugs.zip} }
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